Supplementary meterial for the manuscript

• STable 1-8[Zip] size:1.69M
A hyperlinked version of the supplementary table 1 to 8 is provided here to give an example of the user interface. The input file, dataset downloaded from NCBI, is from a study that examined the influences of obesity and kinship on microbial community composition in the mouse gut (Ley et al., 2005). The data was not in chromatogram but Fasta format, therefore, information of sequence quality was not available. However, this result may be an good performance evaluation of OTU_Misses.

Software Download

• OTU_Misess[Zip] size:39M


The compressed file OTU_Misess.tar.gz/OTU_Misess.zip contains the main scripts and the the test data for installing and testing this program.

Essential Dataset for the software

• 16S [zip] size: 14.4M


1.http://rdp.cme.msu.edu/misc/
Fasta file was made from RDP Release 9.57
2.http://greengenes.lbl.gov/Download/Taxonomic_Outlines/
Taxon list from RDP_SeqDescByOTU_tax_outline.txt at 12-Jan-2008 22:18
• 18S [zip] size: 13.6M


NCBI CoreNucletide http://www.ncbi.nlm.nih.gov/sites/entrez?db=nuccore&cmd=search&term=18S+ribosomal+RNA+gene Fasta file and the taxon list were made from the search results at 26-Jan-2008.